Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479638: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-220476' containing sample 'M1309'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.9M spots, 983.6M bases, 534.5Mb downloads

UUID: 943c003c-c59e-468c-a7f8-1989c54ceaf9

Design: Illumina sequencing of Mycobacterium tuberculosis M1309 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235667 • SRP037904 • All experiments • All runs

Sample:

SAMN02599002 • SRS557811 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1309

Library:

Name: Solexa-220476

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 485603.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:5G7JL

material_type: DNA:DNA Somatic

product_order: PDO-2811

product_part_number: P-MCV-0004

project: G57740

research_project: RP-114

root_sample_id: SM-4P55U

sample_id: SM-5G7JL

work_request: 39948

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.9M spots, 983.6M bases, 534.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180334	2,413,817	487.6M	264.4Mb	2014-03-01
SRR1180492	2,455,405	496M	270.1Mb	2014-03-01

ID:: 669072

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